Publications

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2018

Jae-Woong; Zhang Chang, Wei; Yeh; Yong, Jeongsik#

An integrative model for alternative polyadenylation, IntMAP, delineates mTOR-modulated endoplasmic reticulum stress response Journal Article

In: Nucleic Acids Research, vol. 46, no. 12, pp. P5996–6008, 2018.

Abstract | BibTeX | Tags: Transcriptome

2016

Liang, Lining; Sun, Hao; Zhang, Wei; Zhang, Mengdan; Yang, Xiao; Kuang, Rui; Zheng, Hui

Meta-Analysis of EMT Datasets Reveals Different Types of EMT. Journal Article

In: PloS one, vol. 11, no. 6, pp. e0156839–e0156839, 2016.

Abstract | Links | BibTeX | Tags: Gene Expression, Transcriptome

2013

Zhang, Wei; Ota, Takayo; Shridhar, Viji; Chien, Jeremy; Wu, Baolin; Kuang, Rui

Network-based survival analysis reveals subnetwork signatures for predicting outcomes of ovarian cancer treatment Journal Article

In: PLoS Comput Biol, vol. 9, no. 3, pp. e1002975, 2013.

Abstract | Links | BibTeX | Tags: Cancer Genomics, Network-based Learning, Survival Analysis, Transcriptome

2010

Fang, Gang; Kuang, Rui; Pandey, Gaurav; Steinbach, Michael; Myers, Chad L; Kumar, Vipin

Subspace differential coexpression analysis: problem definition and a general approach. Proceedings Article

In: Pacific symposium on biocomputing, pp. 145–56, 2010.

Abstract | Links | BibTeX | Tags: Gene Expression, Transcriptome