Melvin, Iain, Eugene Ie, Rui Kuang, Jason Weston, William Stafford Noble, and Christina Leslie. 2007. “SVM-Fold: A Tool for Discriminative Multi-Class Protein Fold and Superfamily Recognition”. In BMC Bioinformatics, 8:1-15. Springer.
Rui Kuang
First name
Rui
Last name
Kuang
Zhang, Huanan, Feng Cheng, Yuguo Xiao, Xiaojun Kang, Xiaowu Wang, Rui Kuang, and Min Ni. 2017. “Global Analysis of Canola Genes Targeted by SHORT HYPOCOTYL UNDER BLUE 1 During Endosperm and Embryo Development”. The Plant Journal 91. Wiley Online Library: 158-71.
Hauck, Amy K, Tong Zhou, Wendy Hahn, Raphael Petegrosso, Rui Kuang, Yue Chen, and David A Bernlohr. 2018. “Obesity-Induced Protein Carbonylation in Murine Adipose Tissue Regulates the DNA-Binding Domain of Nuclear Zinc Finger Proteins”. Journal of Biological Chemistry 293. Elsevier: 13464-76.
Hwang, Taehyun, Gowtham Atluri, Maoqiang Xie, Sanjoy Dey, Changjin Hong, Vipin Kumar, and Rui Kuang. 2012. “Co-Clustering Phenome-Genome for Phenotype Classification and Disease Gene Discovery”. Nucleic Acids Research 40. Oxford University Press: e146—e146.
Min, Renqiang, Rui Kuang, Anthony Bonner, and Zhaolei Zhang. 2009. “Learning Random-Walk Kernels for Protein Remote Homology Identification and Motif Discovery”. In Proceedings of the 2009 SIAM International Conference on Data Mining, 133-44. SIAM.
Li, Zhuliu, Wei Zhang, Stephanie Huang, and Rui Kuang. 2019. “Learning a Low-Rank Tensor of Pharmacogenomic Multi-Relations from Biomedical Networks”. In 2019 IEEE International Conference on Data Mining (ICDM), 409-18. IEEE.
Kulman, Ethan, Rui Kuang, and Quaid Morris. 2024. “Orchard: Building Large Cancer Phylogenies Using Stochastic Combinatorial Search”. PLoS Computational Biology 20. Public Library of Science San Francisco, CA USA: e1012653.
Hwang, Tae Hyun, Gowtham Atluri, Rui Kuang, Vipin Kumar, Timothy Starr, Kevin AT Silverstein, Peter M Haverty, Zemin Zhang, and Jinfeng Liu. 2013. “Large-Scale Integrative Network-Based Analysis Identifies Common Pathways Disrupted by Copy Number Alterations across Cancers”. BMC Genomics 14. Springer: 1-13.
Li, Zhuliu, Raphael Petegrosso, Shaden Smith, David Sterling, George Karypis, and Rui Kuang. 2021. “Scalable Label Propagation for Multi-Relational Learning on the Tensor Product of Graphs”. IEEE Transactions on Knowledge and Data Engineering 34. IEEE: 5964-78.
Xie, Maoqiang, Taehyun Hwang, and Rui Kuang. 2012. “Prioritizing Disease Genes by Bi-Random Walk”. In Advances in Knowledge Discovery and Data Mining: 16th Pacific-Asia Conference, PAKDD 2012, Kuala Lumpur, Malaysia, May 29&Mdash;June 1, 2012, Proceedings, Part II 16, 292-303. Springer.