Leslie, Christina, and Rui Kuang. 2004. “Fast String Kernels Using Inexact Matching for Protein Sequences”. Journal of Machine Learning Research 5: 1435-55.
Rui Kuang
First name
Rui
Last name
Kuang
Cai, Hong, Timothy G Lilburn, Changjin Hong, Jianying Gu, Rui Kuang, and Yufeng Wang. 2015. “Predicting and Exploring Network Components Involved in Pathogenesis in the Malaria Parasite via Novel Subnetwork Alignments”. BMC Systems Biology 9. Springer: 1-11.
Petegrosso, Raphael, Zhuliu Li, Molly A Srour, Yousef Saad, Wei Zhang, and Rui Kuang. 2019. “Scalable Remote Homology Detection and Fold Recognition in Massive Protein Networks”. Proteins: Structure, Function, and Bioinformatics 87. Wiley Online Library: 478-91.
Johnson, Nicholas, Huanan Zhang, Gang Fang, Vipin Kumar, and Rui Kuang. 2015. “SubPatCNV: Approximate Subspace Pattern Mining for Mapping Copy-Number Variations”. BMC Bioinformatics 16. Springer: 1-12.
Zhang, Wei, Raphael Petegrosso, Jae-Woong Chang, Jiao Sun, Jeongsik Yong, Jeremy Chien, and Rui Kuang. 2020. “A Large-Scale Comparative Study of Isoform Expressions Measured on Four Platforms”. BMC Genomics 21. Springer: 1-14.
Cai, Hong, Changjin Hong, Jianying Gu, Timothy G Lilburn, Rui Kuang, and Yufeng Wang. 2012. “Module-Based Subnetwork Alignments Reveal Novel Transcriptional Regulators in Malaria Parasite Plasmodium Falciparum”. BMC Systems Biology 6. Springer: 1-13.
Zhang, Wei, Jae-Woong Chang, Lilong Lin, Kay Minn, Baolin Wu, Jeremy Chien, Jeongsik Yong, Hui Zheng, and Rui Kuang. 2015. “Network-Based Isoform Quantification With RNA-Seq Data for Cancer Transcriptome Analysis”. PLoS Computational Biology 11. Public Library of Science San Francisco, CA USA: e1004465.
Petegrosso, Raphael, Tianci Song, and Rui Kuang. 2020. “Hierarchical Canonical Correlation Analysis Reveals Phenotype, Genotype, and Geoclimate Associations in Plants”. Plant Phenomics. AAAS.
Cai, Hong, Rui Kuang, Jianying Gu, and Yufeng Wang. 2011. “Proteases in Malaria Parasites-a Phylogenomic Perspective”. Current Genomics 12. Bentham Science Publishers: 417-27.
Roe, David, Cynthia Vierra-Green, Chul-Woo Pyo, Daniel E Geraghty, Stephen R Spellman, Martin Maiers, and Rui Kuang. 2020. “A Detailed View of KIR Haplotype Structures and Gene Families As Provided by a New Motif-Based Multiple Sequence Alignment”. Frontiers in Immunology 11. Frontiers Media SA: 585731.